Bionformation Detection of Magnetic Nanoparticles Producers Among Iron- and Manganese-Oxidizing Bacteria

Authors

DOI:

https://doi.org/10.20535/ibb.2018.2.2.124256

Keywords:

Iron- and manganese-oxidizing bacteria, Biogenic magnetic nanoparticles, Biomineralization, Magnetospirillum gryphiswaldense MSR-1, Mam-proteins, Water purification

Abstract

Background. In Ukraine, more than 17 % of underground water intakes are classified as unfunded in terms of iron content and 4.4 % in terms of manganese content. The increased content of these elements leads to a deterioration in the organoleptic properties of drinking water, the formation of precipitation and overgrowing of the water supply networks due to the development of iron-oxidizing bacteria. Therefore, it is important to study the magnetic properties of iron- and manganese-oxidizing bacteria for the possibility of their use in magnetic separation technologies in order to improve water treatment technologies with excess iron and manganese content.

Objective. The aim of the paper is to search for potential producers of BMN among iron- and manganese-oxidizing bacteria and classify them by an internal structure (crystalline or amorphous) and BMN allocation (extracellular or intracellular), using comparative genomics methods.

Methods. To evaluate the degree of similarity of BMN biomineralization proteins in MTB Magnetospirillum gryphiswaldense MSR-1 and in iron- and manganese-oxidizing bacteria, pair and multiple alignment methods using the free access program BLAST of the National Center for Biotechnological Information were used.

Results. The bioinformatic analysis showed that among the 30 investigated iron- and manganese-oxidizing bacteria which belong to 5 genera (Gallionella, Siderocapsa, Sphaerotilus, Hyphomicrobium, Leptothrix), 28 microorganisms are potential producers of BMN.

Conclusions. Conclusions are made about the prospects of further investigation of the influence of the magnetic field on the microorganisms of genera: Leptotrix, Sphaerotillus, Gallionella, Hyphomicrobium. An important direction for further experiments is the study of possible ways of conducting magnetic separation of iron- and manganese-oxidizing bacteria to prevent secondary contamination of drinking water and the formation of scales in pipelines. The use of the magnetic properties of the investigated microorganisms is useful for the development of ways to remove old scales within pipelines.

Author Biography

Olena Panchenko, State Enterprise "Scientific, Research, Design and Technology Institute of Municipal Economy"

 

 

 

References

Iron bacteria in drinking water supply systems [Internet]. Wwtec.ru. 2018 [cited 1 February 2018]. Available from: http://wwtec.ru/index.php?id=418

Prokopov VO. Drinking water in Ukraine: Medico-ecological and sanitary-hygienic aspects. Kyiv: VSV ''Medicina''; 216. 400 p.

Kravchenko O. Development of methods for identification of microbial cultures that are able to oxidize iron and manganese compounds in natural waters. Problemy Vodopostachannya, Vodovidvedennya ta Hidravliky. 2014;24:140-5.

Yan L, Da H, Zhang S, López V, Wang W. Bacterial magnetosome and its potential application. Microbiol Res. 2017;203:19-28. DOI: 10.1016/j.micres.2017.06.005

Gorobets OYu, Gorobets SV, Sorokina LV. Biomineralization and synthesis of biogenic magnetic nanoparticles and magnetosensitive inclusions in microorganisms and fungi. Functional Mater. 2014;21(4):427-36. DOI: 10.15407/fm21.04.427

Gorobets O, Gorobets S, Gorobets Y. Biogenic magnetic nanoparticles: Biomineralization in prokaryotes and eukaryotes. 3rd ed. Dekker Encyclopedia of Nanoscience and Nanotechnology. New York: CRC Press; 2014. p. 300-8.

Gorobets O, Gorobets S, Koralewski M. Physiological origin of biogenic magnetic nanoparticles in health and disease: From bacteria to humans. Int J Nanomed. 2017;12:4371-95. DOI: 10.2147/IJN.S130565

Gorobets S, Gorobets O, Butenko K. Potential producers of biogenic magnetic nanoparticles among pathogenic and opportunistic microorganisms. Naukovi Visti NTUU KPI. 2015;3:23-32.

Gorobets S, Gorobets O, Gorobets Yu. Biomineralization of intracellular biogenic magnetic nanoparticles and their possible functions. Naukovi Visti NTUU KPI. 2013;3:28-33.

Gorobets S, Mikhaylenko N. High gradient ferromagnetic matrices for waste water purification, obtained by magnetoelectrolysis method. J Water Chem Technol. 2014;3:153-9.

BLAST: Basic Local Alignment Search Tool [Internet]. Blast.ncbi.nlm.nih.gov. 2018 [cited 22 February 2018]. Available from: http://blast.ncbi.nlm.nih.gov

Ullrich S, Kube M, Schubbe S, Reinhardt R, Schuler D. A hypervariable 130-kilobase genomic region of Magnetospirillum gryphiswaldense comprises a magnetosome island which undergoes frequent rearrangements during stationary growth. J Bacteriol. 2005;187(21):7176-84. DOI: 10.1128/JB.187.21.7176-7184.2005

Schübbe S, Würdemann C, Peplies J, Heyen U, Wawer C, Glöckner F, et al. Transcriptional organization and regulation of magnetosome operons in Magnetospirillum gryphiswaldense. Appl Environ Microbiol. 2006;72(9):5757-65. DOI: 10.1128/ AEM.00201-06

Li W, Pio F, Pawlowski K, Godzik A. Saturated BLAST: An automated multiple intermediate sequence search used to detect distant homology. Bioinformatics. 2000 Dec;16(12):1105-10. DOI: 10.1093/bioinformatics/16.12.1105

Hallberg R, Ferris F. Biomineralization by Gallionella. Geomicrobiol J. 2004;21(5):325-30. DOI: 10.1080/01490450490454001

Suzuki T, Hashimoto H, Matsumoto N, Furutani M, Kunoh H, Takada J. Nanometer-scale visualization and structural analysis of the inorganic/organic hybrid structure of Gallionella ferruginea twisted stalks. Appl Environ Microbiol. 2011;77(9):2877-81. DOI: 10.1128/AEM.02867-10

Søgaard E, Aruna R, Abraham-Peskir J, Bender Koch C. Conditions for biological precipitation of iron by Gallionella ferruginea in a slightly polluted ground water. Appl Geochem. 2001;16(9-10):1129-37. DOI: 10.1016/s0883-2927(01)00014-2

Shi X, Avci R, Lewandowski Z. Electrochemistry of passive metals modified by manganese oxides deposited by Leptothrix discophora: Two-step model verified by ToF-SIMS. Corrosion Sci. 2002;44(5):1027-45. DOI: 10.1016/S0010-938X(01)00104-4

Banfield J. Aggregation-based crystal growth and microstructure development in natural iron oxyhydroxide biomineralization products. Science. 2000;289(5480):751-4. DOI: 10.1126/science.289.5480.751

Keim C, Nalini H, de Lena J. Manganese oxide biominerals from freshwater environments in Quadrilatero Ferrifero, Minas Gerais, Brazil. Geomicrobiol J. 2014;32(6):549-59. DOI: 10.1080/01490451.2014.978513

Seder-Colomina M, Morin G, Benzerara K, Ona-Nguema G, Pernelle J, Esposito G, et al. Sphaerotilus natans, a neutrophilic iron-related sheath-forming bacterium: Perspectives for metal remediation strategies. Geomicrobiol J. 2013;31(1):64-75. DOI: 10.1080/01490451.2013.806611

Park S, Kim D, Lee J, Hur H. Sphaerotilus natans encrusted with nanoball-shaped Fe(III) oxide minerals formed by nitrate-reducing mixotrophic Fe(II) oxidation. FEMS Microbiol Ecol. 2014;90(1):68-77. DOI: 10.1111/1574-6941.12372.

Published

2018-06-25

How to Cite

1.
Gorobets S, Kravchenko O, Bulaievska M, Panchenko O. Bionformation Detection of Magnetic Nanoparticles Producers Among Iron- and Manganese-Oxidizing Bacteria. Innov Biosyst Bioeng [Internet]. 2018Jun.25 [cited 2024Dec.10];2(2):90-7. Available from: https://ibb.kpi.ua/article/view/124256

Issue

Section

Articles