Innovative Biosystems and Bioengineering https://ibb.kpi.ua/ <div><strong>Holiday Break Notice: 17th Dec <span data-ukrnet-code="2023">2024</span> to 7th Jan <span data-ukrnet-code="2024">2025</span></strong></div> <div>Dear Authors, Reviewers, and Readers,</div> <div>The editorial team is taking a short break from December 17th, <span data-ukrnet-code="2023">2024</span>, to January 7th, <span data-ukrnet-code="2024">20254</span>, to celebrate the holiday season. During this period, there will be a temporary pause in the processing of new submissions, reviews, and editorial activities.</div> <div>We want to express our sincere gratitude for your continuous support throughout the year. As we approach the festive season, we wish you a joyous holiday filled with warmth and happiness.</div> <div>Thank you for your understanding, and we look forward to resuming our regular activities in January.</div> <div>Warm regards,</div> <div>IBB</div> <p>The scientific journal <em>Innovative Biosystems and Bioengineering</em> was founded in 2017. IBB introduces a systems approach to life sciences problems.</p> <p>IBB is a quarterly peer-reviewed Open Access e-journal in which readers, immediately upon online publication, can access articles free of costs and subscription charges.</p> <p>e-ISSN 2616-177X</p> <p>Founder and Publisher: National Technical University of Ukraine “Igor Sikorsky Kyiv Polytechnic Institute”.</p> <p>Frequency: 4 issues a year.</p> <p>We accept papers in following languages: English, Ukrainian.</p> <p>Cite the title as: Innov Biosyst Bioeng.</p> <p>Readership: Biotechnologists, Bioengineers, Biomedical researchers and engineers, Biologists.</p> <p>Indexing: Scopus; DOAJ; ROAD; HINARI; Chemical Abstracts Service; CNKI Scholar; Norwegian Register for Scientific Journals, Series and Publishers; J-Gate; Public Knowledge Project Index; ICMJE; JournalTOCs; WCOSJ; Vifabio; EZB; Federation of Finnish Learned Societies; Zeitschriftendatenbank; Polska Bibliografia Naukowa; Scilit; Bielefeld Academic Search Engine; OpenAir; WorldCat.</p> en-US <p><span>The ownership of copyright remains with the Authors.</span></p><p>Authors may use their own material in other publications provided that the Journal is acknowledged as the original place of publication and National Technical University of Ukraine “Igor Sikorsky Kyiv Polytechnic Institute” as the Publisher.</p><p>Authors are reminded that it is their responsibility to comply with copyright laws. It is essential to ensure that no part of the text or illustrations have appeared or are due to appear in other publications, without prior permission from the copyright holder.</p>IBB articles are published under Creative Commons licence:<br /><ol type="a"><li>Authors retain copyright and grant the journal right of first publication with the work simultaneously licensed under <a href="https://creativecommons.org/licenses/by/4.0/">CC BY 4.0</a> that allows others to share the work with an acknowledgement of the work's authorship and initial publication in this journal.<br /><br /></li><li>Authors are able to enter into separate, additional contractual arrangements for the non-exclusive distribution of the journal's published version of the work (e.g., post it to an institutional repository or publish it in a book), with an acknowledgement of its initial publication in this journal.<br /><br /></li><li>Authors are permitted and encouraged to post their work online (e.g., in institutional repositories or on their website) prior to and during the submission process, as it can lead to productive exchanges, as well as earlier and greater citation of published work.</li></ol> ibb@lll.kpi.ua (Liudmyla Trotsenko) ibb@lll.kpi.ua (Liudmyla Trotsenko) Mon, 09 Dec 2024 00:00:00 +0200 OJS 3.2.1.2 http://blogs.law.harvard.edu/tech/rss 60 Effects of Acute Alcohol Intoxication on Testicular Dna Stability, Gene Expression of Cytochromes CYP3A and CYP2E1, and Serum Pool of Free Amino Acids in Rats https://ibb.kpi.ua/article/view/317136 <p><strong>Background</strong><strong>.</strong> Alcohol's toxic effects on the organism is a long-known medical problem. Alcohol's damaging effect is the end result of the complex interplay between ethanol metabolism, inflammation and innate immunity. Previously, we studied the long-term consequences of chronic alcoholism and demonstrated that especially profound changes were in testes on the level of proteome and genome.</p> <p><strong>Objective.</strong> This work aimed to study short-term acute alcohol intoxication (AAI) effects for rat testis DNA fragmentation, cytochromes CYP3A and CYP2E1 genes expression, and serum pool of free amino acids in rats.</p> <p><strong>Methods</strong><strong>.</strong> Wistar albino male rats were divided into 2 groups (8 animals in each group): 1 – Control (intact rats), and 2 – AAI (rats with short-term acute alcohol intoxication). AAI was induced by repeated administration per os 40% ethanol solution in a dose 7 ml/kg body weight, for 7 days. Contents of amino acids in serum, testes mRNA CYP2E1 and CYP3A2 expression, and DNA fragmentation were evaluated.</p> <p><strong>Results</strong><strong>.</strong> In our experiments, the development of acute alcohol intoxication (AAI) led to increased DNA fragmentation processes in the testes of adult rats compared to the control group. Additionally, in the serum of ethanol-treated rats, the levels of histidine increased by 1.67 times and glutamine by 1.13 times in correlation with this pathology. Conversely, the levels of valine, phenylalanine, as well as non-essential and essential amino acids, decreased. Furthermore, there was a statistically significant increase in the expression of CYP2E1 and CYP3A2 genes in rat testes under the conditions of AAI.</p> <p><strong>Conclusions.</strong> In conclusion, investigation of rats' short-term alcohol administration effects permitted us to obtain the picture of complex metabolomic changes at the different levels. The main outcome of rats short-term ethanol administration in our experiments seems to be to some extent similar to changes described for rats with chronic alcohol consumption. Our results demonstrated profound changes in testes affecting the state of the genome, transcription processes and the exchange of amino acids and proteins. We suggest that the revealed testicular metabolic disorders could have negative implications on cellular regulation of spermatogenesis even under short-term ethanol exposure.</p> Larysa Bondarenko, Ganna Shayakhmetova, Olga Kharchenko, Maria Kalachinskaya, Natalia Serhiichuk, Valentyna Kovalenko, Olexandr Besarab Copyright (c) 2024 The Author(s) http://creativecommons.org/licenses/by/4.0 https://ibb.kpi.ua/article/view/317136 Mon, 09 Dec 2024 00:00:00 +0200 Effect of Fullerene C60 on Tomato Plants https://ibb.kpi.ua/article/view/317138 <p><strong>Background.</strong> Fullerenes, one of the allotropic forms of carbon, are the focus of intensive research in nanobio­technology. Due to their unique physicochemical properties, there is growing interest in using them to enhance plant productivity and provide protection against various stresses. However, data on the effects of fullerenes on different plants are often contradictory.</p> <p><strong>Objective. </strong>To investigate the effect of colloidal water-soluble fullerene C<sub>60</sub> on various stages of tomato deve­lopment.</p> <p><strong>Methods.</strong> The study examined the influence of fullerene C<sub>60</sub> (0–50 µg/ml) on the seed germination of the Money Maker cv. and the growth and development of seedlings and adult plants. For this purpose, morphophysiological parameters such as shoot and root length, number of lateral and adventitious roots, fresh weight, accumulation of photosynthetic pigments, and nitric oxide (II) were assessed.</p> <p><strong>Results. </strong>Both positive and some phytotoxic effects of fullerene C<sub>60</sub> on tomatoes were observed. Specifically, inhibition of seedling growth and a decrease in chlorophyll <em>b</em> and carotenoid content in adult plants were noted. Positive effects included an increased seed germination rate, higher fresh weight, greater length and number of adventitious roots in tomatoes grown in the presence of fullerene C<sub>60</sub>, and a higher nitric oxide (II) content in adult plants, which may contribute to enhanced stress resistance.</p> <p><strong>Conclusions. </strong>Fullerene C<sub>60</sub> at a concentration of 25&nbsp;μg/ml has a predominantly positive effect on tomato development and may be considered a promising nanomaterial for plant biotechnology.</p> Anastasiia Buziashvili, Svitlana Prylutska, Alla Yemets Copyright (c) 2024 The Author(s) http://creativecommons.org/licenses/by/4.0 https://ibb.kpi.ua/article/view/317138 Mon, 09 Dec 2024 00:00:00 +0200 Design and Development of Novel Herbal Suppository Formulation for Prostatitis Treatment https://ibb.kpi.ua/article/view/317124 <p><strong>Background. </strong>Prostatitis is a common inflammatory condition of the prostate gland, often treated with antibiotics and anti-inflammatory drugs, which may have limited efficacy and side effects. Herbal therapies offer a promising alternative due to their natural anti-inflammatory properties.</p> <p><strong>Objective. </strong>This study aims to design, develop, and evaluate physicochemical, biopharmaceutical and microbiological properties of novel herbal suppository formulations for the treatment of prostatitis, optimizing their biopharmaceutical profiles.</p> <p><strong>Methods. </strong>Excipients were selected to form suppositories with herbal ingredients known for their anti-inflammatory effects, specifically lovage, saw palmetto, and calendula CO<sub>2</sub> extracts. The formulations were assessed based on key quality parameters, including organoleptic characteristics, average mass, melting point, deformation time, disintegration time, microbiological purity, and pH, ensuring compliance with European Pharmacopoeia (<em>Ph. Eur.</em>) standards. Biopharmaceutical studies compared the release profiles of active compounds from different suppository bases.</p> <p><strong>Results. </strong>Suppositories based on Witepsol® H15 exhibited satisfactory organoleptic properties, appropriate melting points, and acceptable deformation and disintegration times. The pH levels were within the required range, and microbiological tests confirmed purity. Biopharmaceutical evaluations showed that Witepsol® H15 suppositories had the most appropriate release rates of active compounds compared to those made with other bases.&nbsp;</p> <p><strong>Conclusions. </strong>The novel herbal suppositories developed in this study show promise for managing prostatitis based on preliminary evaluations of their physicochemical, microbiological, and biopharmaceutical properties. Further clinical studies are required to confirm their efficacy and safety.</p> Olena Golembiovska, Oleksandra Dmytrenko, Alexander Galkin Copyright (c) 2024 The Author(s) http://creativecommons.org/licenses/by/4.0 https://ibb.kpi.ua/article/view/317124 Mon, 09 Dec 2024 00:00:00 +0200 Effect of Acids on Biomass Growth and Development of Chlorella vulgaris Culture https://ibb.kpi.ua/article/view/313941 <p><strong>Background.</strong> Influence of dissolved nitrogen and sulfur oxides, as components of flue gases, on the cultivation of microalgae <em>Chlorella vulgaris.</em></p> <p><strong>Objective.</strong> To study biomass production and changes in cells of the microalgae <em>Chlorella vulgaris</em> with the introduction of nitrogen and sulfate acids tor simulate the effects of dissolved nitrogen and sulfur oxides, aiming to develop biotechnology for the utilization of gas emissions by microalgae.</p> <p><strong>Methods.</strong> The effect of the constant introduction of small concentrations of nitrogen (up to 0.47%) and sulfate (up to 1.5%) acids on the development of <em>Chlorella vulgaris </em>cultures, pH changes in the cultural envi­ronment, and biomass growth were studied.</p> <p><strong>Results.</strong> The utilization of gaseous emissions by <em>Chlorella </em><em>vulgaris</em> depends on the content of nitrogen and sulfur oxides that are constantly supplied to the cultivation medium, the initial biomass concentration, and pH. It was determined that for an initial cells concentration of (85 ± 5)<strong>×</strong>10<sup>4</sup> cells/ml in the culture medium, the threshold values of acids that do not cause significant changes in the cultivation process are 0.1% H₂SO₄ and 0.19% HNO₃. At a sulfuric acid concentration of 0.2%, the culture cells become discolored.</p> <p><strong>Conclusions.</strong> It is shown that with a constant supply of sulfuric or nitric acids above the threshold values of 0.1% H<sub>2</sub>SO<sub>4</sub> and 0.19% HNO<sub>3</sub>, the pH of the culture medium decreases, leading to the suspension of deve­lopment and the death of the <em>Chlorella vulgaris</em> culture. Therefore, controling these parameters will improve the ecological state of the environment and form the basis for developing biotechnology for the utilization of gas emissions by microalgae.</p> Alona Vdovychenko, Nataliia Golub, Marcin Zieliński, Igor Levtun Copyright (c) 2024 The Author(s) http://creativecommons.org/licenses/by/4.0 https://ibb.kpi.ua/article/view/313941 Wed, 11 Dec 2024 00:00:00 +0200 Cytodestructive Effects of Photodynamic Exposure in Primary Cultures of Malignant Glioma Cells https://ibb.kpi.ua/article/view/317985 <p><strong>Background</strong><strong>.</strong> Photodynamic therapy (PDT) is a promising adjuvant method for the treatment of malignant gliomas (MG), including tumors with continued growth and tumor recurrences. For the clinical application of PDT, it is important to substantiate the effectiveness of the cytodestructive effect of the combined use of laser irradiation (LI) and photosensitizer (PS).</p> <p><strong>Objective</strong><strong>.</strong> To evaluate the cytodestructive effects of photodynamic exposure with the use of PS chlorine E6 on primary MG cell cultures.</p> <p><strong>Methods</strong><strong>.</strong> Primary cell cultures were obtained from samples of biopsy material from patients (<em>n</em> = 6) with a veri­fied diagnosis: 3 primary tumors (1 case of diffuse astrocytoma, NOS (G3), 1 – glioblastoma (GB), NOS (G4), 1 – gliosarcoma (G4)) and 3 – with continued tumor growth (1 – diffuse astrocytoma, NOS (G3), 1 – oligo­dendroglioma, NOS (G3) and 1 – GB, NOS (G4). Groups of cell cultures included: 1) control – cultured in a standard nutrient medium and experimental; 2) cultured with the addition of chlorine E6 (2.0 mg/ml); 3) cultivated without the addition of PS and subjected to LI; 4) cultivated with the addition of chlorine E6 and subsequent exposure to LI. After 24 h, morphological and morpho­metric studies were carried out.</p> <p><strong>Results</strong><strong>.</strong> The primary MG cultures were characterized by different growth dynamics; mitotic activity of tumor cells varied from the highest rate in the culture of primary GB to lower values – in cultures of recurrent GB and primary astrocytoma and gliosarcoma, and the lowest – in cultures of continued growth of astrocytoma and oligodendroglioma after combined treatment. Direct exposure to chlorine E6 and LI reduced the total number of cells in the culture and their mitotic activity. The greatest cytodestructive effect was achieved with the combined effect of chlorine E6 and LI: the effective dose in the case of primary astrocytoma cells is 10 J/cm<sup>2</sup> in pulse mode; for cells of primary GB and gliosarcoma, recurrent astrocytoma and oligodendro­glioma, the effective dose is 25 J/cm<sup>2</sup> in pulsed mode. In the case of GB cells, continued growth, a dose of 25 J/cm<sup>2</sup> is effective for both continuous and pulsed modes of LI.</p> <p><strong>Conclusions</strong><strong>.</strong> Primary cell cultures of MG obtained directly from tumor tissue are an adequate model for evaluating the effectiveness of the cytodestructive effect of the combined use of LI and PS for PDT.</p> Volodymyr Rozumenko, Larysa Liubich, Larysa Staino, Diana Egorova, Andrii Dashchakovskyi, Tatyana Malysheva Copyright (c) 2024 The Author(s) http://creativecommons.org/licenses/by/4.0 https://ibb.kpi.ua/article/view/317985 Mon, 16 Dec 2024 00:00:00 +0200